CycPeptMPDB ID: 1936

Peptide Information

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Source 2018_CHUGAI
Original Name in Source Literature pd111
Permeability 1 -6.80  (Caco2)
Detection Limit of Permeability 1 N.D
Permeability 2 N.D
Detection Limit of Permeability 2 N.D
Molecular Weight 1450.92
Monomer Length 11
Molecule Shape Circle
EPSA N.D
Other Sources N.D


Structural Information

Structure
WARNING
3D structure on the left is the minimum energy conformation obtained by the force field of molecular mechanics. This conformation likely does not reflect what is found in biological systems, and most peptides populate ensembles rather than a single conformation.


image_2Dstructure_1936
Canonical SMILES CC[C@H](C)[C@H]1C(=O)N[C@@H]([C@@H](C)O)C(=O)N(C)CC(=O)N(C)[C@@H](CC(C)C)C(=O)N[C@H](C(=O)N2CCCCC2)CC(=O)N(C)[C@@H](CC(C)C)C(=O)N[C@@H](CC(C)C)C(=O)N(C)[C@@H](CC(C)C)C(=O)N(C)[C@@H](Cc2c[nH]c3ccccc23)C(=O)N[C@@H](CC(C)C)C(=O)N(C)[C@@H](Cc2ccccc2)C(=O)N1C
Sequence (HELM) PEPTIDE1936
{[meL].L.[meL].[meW].L.[meF].[meI].T.[Sar].[meL].[Asp_piperidide]}
$PEPTIDE1936,PEPTIDE1936,1:R1-11:R2$$$ image_HELM_1936


Physicochemical Properties

LogP 5.39 (Calculated by RDKit)
Ring Count 5 (Calculated by RDKit)
Heavy Atom Count 104 (Calculated by RDKit)
Hydrogen Bond Acceptor Count 13 (Calculated by RDKit)
Hydrogen Bond Donor Count 6 (Calculated by RDKit)
Topological Polar Surface Area 314.90 (Calculated by RDKit)
3D Polar Surface Area in Chloroform 228.00 (Calculated by Dr. Richard A. Lewis)
3D Polar Surface Area in Water 226.00 (Calculated by Dr. Richard A. Lewis)