CycPeptMPDB ID: 6166

Peptide Information

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Source 2021_Kelly
Original Name in Source Literature L1_15.3.1.2.1.2
Permeability 1 -6.79  (PAMPA) (%R: 83.47) (%T: 2.56)
Detection Limit of Permeability 1 N.D
Permeability 2 N.D
Detection Limit of Permeability 2 N.D
Molecular Weight 1002.31
Monomer Length 10
Molecule Shape Lariat
EPSA N.D
Other Sources N.D


Structural Information

Structure
WARNING
3D structure on the left is the minimum energy conformation obtained by the force field of molecular mechanics. This conformation likely does not reflect what is found in biological systems, and most peptides populate ensembles rather than a single conformation.


image_2Dstructure_6166
Canonical SMILES CC(=O)N1CCC[C@@H]1C(=O)N(C)[C@H](CC(C)C)C(=O)N[C@@H]1C(=O)N(C)[C@@H](CC(C)C)C(=O)N[C@@H](CC(C)C)C(=O)N[C@H](CC(C)C)C(=O)N[C@@H](C)C(=O)N[C@H](CC(C)C)C(=O)N2CCC[C@H]2C(=O)O[C@@H]1C
Sequence (HELM) PEPTIDE6166
{[ac-].[dP].[Me_dL].T.[meL].L.[dL].A.[dL].P}
$PEPTIDE6166,PEPTIDE6166,4:R3-10:R2$$$ image_HELM_6166


Physicochemical Properties

LogP 2.26 (Calculated by RDKit)
Ring Count 3 (Calculated by RDKit)
Heavy Atom Count 71 (Calculated by RDKit)
Hydrogen Bond Acceptor Count 11 (Calculated by RDKit)
Hydrogen Bond Donor Count 5 (Calculated by RDKit)
Topological Polar Surface Area 253.04 (Calculated by RDKit)
3D Polar Surface Area in Chloroform 202.00 (Calculated by Dr. Richard A. Lewis)
3D Polar Surface Area in Water 199.00 (Calculated by Dr. Richard A. Lewis)