CycPeptMPDB ID: 3476

Peptide Information

Source 2020_Townsend
Original Name in Source Literature hexa_962
Permeability 1 -4.99  (PAMPA) (%T: 72.28)
Detection Limit of Permeability 1 N.D
Permeability 2 N.D
Detection Limit of Permeability 2 N.D
Molecular Weight 730.95
Monomer Length 6
Molecule Shape Circle
EPSA N.D
Other Sources N.D


Structural Information

Structure
WARNING
3D structure on the left is the minimum energy conformation obtained by the force field of molecular mechanics. This conformation likely does not reflect what is found in biological systems, and most peptides populate ensembles rather than a single conformation.


image_2Dstructure_3476
Canonical SMILES CC(C)C[C@H]1C(=O)N[C@@H](Cc2ccccc2)C(=O)N(C)[C@@H](C)C(=O)N(C)[C@H](CC(C)C)C(=O)N(Cc2ccccc2)CC(=O)N2CCC[C@@H]2C(=O)N1C
Sequence (HELM) PEPTIDE3476
{[meA].[Me_dL].[Bn_Gly].[dP].[meL].F}
$PEPTIDE3476,PEPTIDE3476,1:R1-6:R2$$$ image_HELM_3476


Physicochemical Properties

LogP 3.34 (Calculated by RDKit)
Ring Count 4 (Calculated by RDKit)
Heavy Atom Count 53 (Calculated by RDKit)
Hydrogen Bond Acceptor Count 6 (Calculated by RDKit)
Hydrogen Bond Donor Count 1 (Calculated by RDKit)
Topological Polar Surface Area 130.65 (Calculated by RDKit)
3D Polar Surface Area in Chloroform 77.00 (Calculated by Dr. Richard A. Lewis)
3D Polar Surface Area in Water 76.00 (Calculated by Dr. Richard A. Lewis)