CycPeptMPDB ID: 1858

Peptide Information

Source 2017_Boehm
Original Name in Source Literature Compd.24
Permeability 1 -5.08  (RRCK)
Detection Limit of Permeability 1 N.D
Permeability 2 N.D
Detection Limit of Permeability 2 N.D
Molecular Weight 864.07
Monomer Length 6
Molecule Shape Circle
EPSA 70.00
Other Sources N.D


Structural Information

Structure
WARNING
3D structure on the left is the minimum energy conformation obtained by the force field of molecular mechanics. This conformation likely does not reflect what is found in biological systems, and most peptides populate ensembles rather than a single conformation.


image_2Dstructure_1858
Canonical SMILES CC(C)(C)C[C@@H]1NC(=O)CN(CCCc2ccc(F)cc2F)C(=O)[C@H]2CCCN2C(=O)[C@H](Cc2cscn2)NC(=O)[C@H](CC(C)(C)C)NC(=O)[C@@H](Cc2ccccc2)NC1=O
Sequence (HELM) PEPTIDE1858
{[Ala(tBu)].[Tza].[dP].[Mono48].[Ala(tBu)].[dF]}
$PEPTIDE1858,PEPTIDE1858,1:R1-6:R2$$$ image_HELM_1858


Physicochemical Properties

LogP 4.48 (Calculated by RDKit)
Ring Count 5 (Calculated by RDKit)
Heavy Atom Count 61 (Calculated by RDKit)
Hydrogen Bond Acceptor Count 8 (Calculated by RDKit)
Hydrogen Bond Donor Count 4 (Calculated by RDKit)
Topological Polar Surface Area 169.91 (Calculated by RDKit)
3D Polar Surface Area in Chloroform 121.00 (Calculated by Dr. Richard A. Lewis)
3D Polar Surface Area in Water 140.00 (Calculated by Dr. Richard A. Lewis)